Anakin contributes this list of scenes filmed but not included in the final cut of the movie. Could be a good list to start a DVD campaign for. Send an email if you think of more!

1) After the attempted assassination on Padme in the opening, Padme and Palpatine address the senate.

2) Anakin meditates outisde Padme's door (you have seen this as a Lucas Select photo)

3) Anakin's "I've heard this lesson before" shot and line

4) Jocasta Nu (the Jedi archivist) tells Obi-Wan of the 12 lost Jedi and about the "great" Count Dooku.

5) Yoda and Mace discuss the lost Jedi who abandon the Order with Obi-Wan.

6) Mace converses with Obi-wan on the platform before and after Obi-1 get's in his Starfighter. Obi-Wan tells Mace of his aprehensions of Anakin taking Padme back to Naboo and he feels a disturbance in Anakin's feelings. (you have seen this shot in the SW Insider mag)

7) Extended "work shop" scene with Annie and Padme after he killed the Tuskens. Anakin cries (which we saw) - but continues on where he talks of his remorse for doing it and Padme tells him that he is only human.

8) After Padme's capture on Geonosis, she pleads with Dooku to free Obi-Wan.

9) Padme and Anakin are brought before the Trial of Genoisians and sentenced to die in the Arena.

10) Dooku fights Yoda with TWO lightsabers.

11) Padme's family scenes.

UPDATE
More!

12) The still naked C-3P0 and the scene of Padme putting on his coverings. (Petersen)

13) I saw a promo pic at one point of Padme and Beru in the kitchen on Tatooine. I seem to remember thinking that they had a scene or two together. (taramidala)

14) Obi-Wan attacked by Mountain beast (Hankytonk)

15) After Anakin and Amidala are captured, Dooku meets with them at the round table and tries to convince Amidala to join the separatists. (DarthZod)

16) Boba Fett flying away from Kamino

17) Ki-Adi and Plo Koon mission to blow up the Trade Federation Control Core. (Thodge)

18) Jar Jar's diplo-dialect scenes. Also the laughter after he says, "Dellow Fellagates." (Hubzilla)

19) Anakin teasing Padme about having Jedi powers.(bleh19)

20) SP-4 Analysis Droid (Hook)